BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A09SP1|AL429004
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig774 1621 0.0
>3x_Contig774
Length = 2612
Score = 1621 bits (811), Expect = 0.0
Identities = 849/869 (97%), Gaps = 1/869 (0%)
Strand = Plus / Minus
Query: 1 tagtaagagcgaacat-gtactatkgaaaataaactttagcgaaggaagakagatgaggg 59
|||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 872 tagtaagagcgaaccccgtactatggaaaataaactttagcgaaggaagagagatgaggg 813
Query: 60 ctgtctatgtgaggaatatatgtatgtttttaagatatcagatatttattcgtcatctta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ctgtctatgtgaggaatatatgtatgtttttaagatatcagatatttattcgtcatctta 753
Query: 120 ggtacttaatatcctctatttatagaatgtcagataagcttgaaggtttaggaccgaatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ggtacttaatatcctctatttatagaatgtcagataagcttgaaggtttaggaccgaatg 693
Query: 180 tcatagtaatgttcttaatattgcmaactcatagtctgtttctttattttcgccagtgtg 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 692 tcatagtaatgttcttaatattgcaaactcatagtctgtttctttattttcgccagtgtg 633
Query: 240 gcactccatgatcacgtgtcagtacacagcacgtgatcaacatactaammtccgggtaat 299
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 632 gcactccatgatcacgtgtcagtacacagcacgtgatcaacatactaaaatccgggtaat 573
Query: 300 caaagaacaaaataacaaaacatgttacccggccatctgtttcgggatttcttcttggtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caaagaacaaaataacaaaacatgttacccggccatctgtttcgggatttcttcttggtt 513
Query: 360 accggaaaaactttcctataggaactggaccagtcattgcgcacgtgactcaaattccat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 accggaaaaactttcctataggaactggaccagtcattgcgcacgtgactcaaattccat 453
Query: 420 catcgcggggactgagcaaaatgcaaaagamattgamaagtttccactatcctatgctgt 479
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 452 catcgcggggactgagcaaaatgcaaaagaaattgaaaagtttccactatcctatgctgt 393
Query: 480 aaaccacaactgtggttttcccgatcccaaaacagcaagcmcgntgccacagcaaagata 539
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 392 aaaccacaactgtggttttcccgatcccaaaacagcaagcacgatgccacagcaaagata 333
Query: 540 acatcaaaacggtctccaataatmctacgtcacgatatgamttccattcccacncntnac 599
||||||||||||||||||||||| |||||| | ||||||| |||||||||||| | | ||
Sbjct: 332 acatcaaaacggtctccaataatactacgtaaagatatgaattccattcccacacataac 273
Query: 600 acagttgtggtttgaatcatcacaggtcggttctctatagagactacggaccactacata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 acagttgtggtttgaatcatcacaggtcggttctctatagagactacggaccactacata 213
Query: 660 cttwgtcaggtacaggctgacacaattcgtggttcttcggttttttccacacattgtatt 719
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cttagtcaggtacaggctgacacaattcgtggttcttcggttttttccacacattgtatt 153
Query: 720 ctgtgtcaagttgctttgcgtccacctgacatatctctttcacacacactctctggtatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ctgtgtcaagttgctttgcgtccacctgacatatctctttcacacacactctctggtatc 93
Query: 780 tttacttcccattactcaaccacataccagttgcaatgacttaagttactcagcttagtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tttacttcccattactcaaccacataccagttgcaatgacttaagttactcagcttagtt 33
Query: 840 gtagttatgttcacaaagtgtgtgtagtt 868
|||||||||||||||||||||||||||||
Sbjct: 32 gtagttatgttcacaaagtgtgtgtagtt 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5191
Number of Sequences: 1807
Number of extensions: 5191
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)